I'm a machine learning and computer scientist working on biological image analysis, interactive visualization, and scientific software. I build open-source tools for exploring large datasets and turning computational methods into useful research workflows.
| Project | What it does |
|---|---|
| Lodstone | Renderer-neutral, view-dependent streaming of multiscale arrays, with integrations for scientific viewers. |
| CellCanvas | Tools for interactive annotation, machine learning, and exploration of cellular architecture. |
| copick | Collaborative annotation and data management for cryo-electron tomography. |
| SciView | Interactive visualization of multidimensional images, meshes, and other scientific data. |
| rstar-python | Python bindings for dynamic spatial indexing with Rust's rstar library. |
I also contribute to napari, VisPy, ndv, and SceneX.
Interested in contributing to CellCanvas? Tell us about the scientific workflow you want to improve so we can identify a useful starting point together.
For other projects, the linked repositories are the best place for questions, reproducible bug reports, examples, and contribution proposals.